MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
19428wC3_WT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 94
bases: 2,526,693 bps
CDS: 2,443
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,502
Total number of protein coding genes annotated/found:
2,443
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5037|JADGLC010000010.1
SEQF5037_00021
Genome Viewer
NA
AA
2946/982
18397-21342
Protease 3
SEQF5037|JADGLC010000010.1
SEQF5037_00022
Genome Viewer
NA
AA
624/208
22019-21396
ADP-ribose pyrophosphatase
SEQF5037|JADGLC010000010.1
SEQF5037_00023
Genome Viewer
NA
AA
420/140
22448-22029
Protein PsiE
SEQF5037|JADGLC010000010.1
SEQF5037_00024
Genome Viewer
NA
AA
717/239
23168-22452
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00025
Genome Viewer
NA
AA
579/193
23736-23158
DNA-3-methyladenine glycosylase 1
SEQF5037|JADGLC010000010.1
SEQF5037_00026
Genome Viewer
NA
AA
1194/398
25096-23903
Murein hydrolase activator NlpD
SEQF5037|JADGLC010000010.1
SEQF5037_00027
Genome Viewer
NA
AA
453/151
25600-25148
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00028
Genome Viewer
NA
AA
585/195
26194-25610
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00029
Genome Viewer
NA
AA
768/256
26958-26191
5'/3'-nucleotidase SurE
SEQF5037|JADGLC010000010.1
SEQF5037_00030
Genome Viewer
NA
AA
399/133
27390-26992
tRNA(fMet)-specific endonuclease VapC
SEQF5037|JADGLC010000010.1
SEQF5037_00031
Genome Viewer
NA
AA
231/77
27620-27390
Antitoxin VapB2
SEQF5037|JADGLC010000010.1
SEQF5037_00032
Genome Viewer
NA
AA
1026/342
28738-27713
tRNA pseudouridine synthase D
SEQF5037|JADGLC010000010.1
SEQF5037_00033
Genome Viewer
NA
AA
792/264
28940-29731
Triosephosphate isomerase
SEQF5037|JADGLC010000010.1
SEQF5037_00034
Genome Viewer
NA
AA
1905/635
30017-31921
Chaperone protein DnaK
SEQF5037|JADGLC010000010.1
SEQF5037_00035
Genome Viewer
NA
AA
468/156
31992-32459
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00036
Genome Viewer
NA
AA
393/131
32456-32848
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00037
Genome Viewer
NA
AA
1134/378
32898-34031
Chaperone protein DnaJ
SEQF5037|JADGLC010000010.1
SEQF5037_00038
Genome Viewer
NA
AA
2490/830
34324-36813
Adenylate cyclase
SEQF5037|JADGLC010000010.1
SEQF5037_00039
Genome Viewer
NA
AA
960/320
37851-36892
hypothetical protein
SEQF5037|JADGLC010000010.1
SEQF5037_00040
Genome Viewer
NA
AA
684/228
38531-37848
putative ferredoxin-like protein YdhX
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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